Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG
1OVS Chain:A ((1-114))
-ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG
General information:
TITO was launched using:
RESULT:
Template:
1OVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41184 for 848 contacts (-48.6/contact) +
2D Compatibility (PS) -13177 + (NN) -12009 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 5700
Total energy: -85862.0 ( -101.25 by residue)
QMean score : 0.686
(partial model without unconserved sides chains):
PDB file :
Tito_1OVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OVS-query.scw
PDB file :
Tito_Scwrl_1OVS.pdb
: