Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTAFFFDELCLWHAAGPHALTLPVGGWVQPPAAAGHAESPETKRRLKSL---LDVSGLTARLQLRSAPPASDEDLLRVHPAHY--------LERFKALSDAGGGSLGQDAPI-----GPG-----------SYEIARLSAGLAIAALDAVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQ--DGCFPPGYSGAEDIGEDRGRGFNLNVP----LLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVD--PLARMQLHSDSFRAMTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRSAVRDPLRDFIELQQPNAAFRDFQRQRLEELAAQFGLCPAQPLQAAR |
| 3C10 Chain:A ((58-397)) | --------------------------------------NSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQ---VMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNL----AGGAVVLALEGGHDLTAICDASEACVAALLGNRV---DPLSEEGWKQKPN------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -174961 for 2623 contacts (-66.7/contact) +
2D Compatibility (PS) -33132 + (NN) -20667 + (LL) 6012
1D Compatibility (HY) -14800 + (ID) 5500
Total energy: -243048.0 ( -92.66 by residue)
QMean score : 0.428
|
|
|