Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKPCHFAQFDLQPAFLVDLDELGQRYRELVRSVHPDRFADAPEREQRLALERAAQLNEAYQTLKSAPRRALYLLTLSGHELPLEATVQDPEFLLQQMQLREELEELQDSADLAGVATFKRRLKAAQAELEREFAACWDDAQRREEAERLVRRMQFLDKLAQEVRQLEERLDD
3UCS Chain:C ((7-66))
-----YYAIMGVKPT--DDLKTIKTAYRRLARKYHPD-VSKEPDAEARF-----KEVAEAWEVLSDEQRRAEY----------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3UCS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11637 for 362 contacts (-32.1/contact) +
2D Compatibility (PS) -6541 + (NN) -6658 + (LL) 10980
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -19306.0 ( -53.33 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3UCS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UCS-query.scw
PDB file :
Tito_Scwrl_3UCS.pdb
: