Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPLYRAAIHQLFLALDLPT-PNDEESVLSLQVGP-HLCHLAEHPTDHLLMFTRLEGQG---DATANEQNLFSQDPCKPILGRDPESGERLLWNRQPLQLLDRAQIHHQLEQLVAAAEELR
3EPU Chain:A ((1-123))
MYSRADRLLRQFSLKLNTDSIVFDENRLCSFIIDNRYRILLTSTNSEYIMIYGFCGKPPDNLAFEFLNANLWFAENNGPHLCYDNNSQSLLLALNFSLNESSVEKLECEIEVVIRSMENLY
General information:
TITO was launched using:
RESULT:
Template:
3EPU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47107 for 779 contacts (-60.5/contact) +
2D Compatibility (PS) -13164 + (NN) -12023 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 1000
Total energy: -80094.0 ( -102.82 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_3EPU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EPU-query.scw
PDB file :
Tito_Scwrl_3EPU.pdb
: