Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGVSRLLSLALLGAALHWAPAQAEEQPRLFELLGQPGYKATW--HAMFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCKPHDCGNNRLLVAFRGDKSAAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRELLMKQLESDPNWK |
4U2K Chain:A ((15-84)) | -----------LNGATLAIIPGDPARVQKIAELMDNPVFLASHREYTVYRAELDGQSVVVCSTGIGGPSTSIAVE-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5735 for 405 contacts (14.2/contact) +
2D Compatibility (PS) -6298 + (NN) 312 + (LL) 4984
1D Compatibility (HY) -3600 + (ID) 900
Total energy: 233.0 ( 0.58 by residue)
QMean score : 0.045
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