Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAADRVMQSYGRCCA-STGFFDDFYRHFLASSPQIRAKFATTD--------------MTAQKHLLRAGIMNLVMYARGMS--DSKLRALGASHSRAALDIRPELYDLWLDALLMAVAEHD-RDCDAETRDAWRDVMGRGIAVIKSYY
1Q1F Chain:A ((4-148))
-PESELIRQSWRVVSRSPLEHGTVLFARLFALEPSLLPLFQYNGRQFSSPEDSLSSPEFLDHIRKVMLVIDAAVTNVEDLSSLEEYLTSLGRKHRA--VGVRLSSFSTVGESLLYMLEKSLGPDFTPATRTAWSRLYGAVVQAMSRGW
General information:
TITO was launched using:
RESULT:
Template:
1Q1F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76990 for 900 contacts (-85.5/contact) +
2D Compatibility (PS) -13603 + (NN) -8428 + (LL) 496
1D Compatibility (HY) -6800 + (ID) 1050
Total energy: -106375.0 ( -118.19 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_1Q1F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q1F-query.scw
PDB file :
Tito_Scwrl_1Q1F.pdb
: