Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
2K21 Chain:A ((42-66))
--LEALYVLMVLGFFGFFTLGIMLSYI-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5052 for 96 contacts (-52.6/contact) +
2D Compatibility (PS) -2790 + (NN) -2274 + (LL) 2576
1D Compatibility (HY) -3600 + (ID) 200
Total energy: -11340.0 ( -118.12 by residue)
QMean score : 0.039
(partial model without unconserved sides chains):
PDB file :
Tito_2K21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K21-query.scw
PDB file :
Tito_Scwrl_2K21.pdb
: