Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQTPEQPSTAPNPALQRQRASQLAQAL--RTELQKALI-----GQGAVIDDVLTALLAGGHVLVEGVPGLGKTLLVRALARCFDGGFARIQFT--PDLMPSDVTGHAVYDLASEQFKLRKGPVFTH---LLLADEINRAPAKTQAALLEVMQERQVTL--EGRALPVPQPFMVLATQNPIEQEGTY----------PLPEAELDRF-MLKLRIDYPAEAEEQTLVRQV--TRSARS--DMLDVANLRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGEFVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV |
| 4FDG Chain:B ((292-579)) | -----------AKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLED--TRIRGDIHILIIGDPGTAKSQMLQFISRV----APRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNP--KFGRYISERPVSDNINLPPTILSRFDLIFILKDQPGE-QDRELANYILDVHSGKSTKNIIDIDTLRKYIAYARKYVTPKITSEAK--NLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYA------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38731 for 1783 contacts (-21.7/contact) +
2D Compatibility (PS) -26916 + (NN) -4078 + (LL) 5124
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -79851.0 ( -44.78 by residue)
QMean score : 0.234
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