Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTLLRRGLLVFLAAFPLLSMAAPTPQQVVQGTVDELLSDIKANKAAYKADPQKLYATLDRILGPVVDAEGIAKSVMTVKYSRQASPEQIKRFEEVFKNSLMQFYGNALLEYDNQDIRVLPSSAKPSDDRASVNMEIRDSKGTVYPVSYTMTNLAGGWKVRNVIINGINIGKLFRDQFADTMQKNRNDLEKTIAGWGEVVAKAKETAKAEEAGAK |
1AAB Chain:A ((42-77)) | --------------------------------------------------------------------------KKCSER-WKTMSAKEKGKFEDMAKADKAR-YEREMKTY------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AAB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2722 for 141 contacts (19.3/contact) +
2D Compatibility (PS) -3697 + (NN) -1067 + (LL) 12296
1D Compatibility (HY) 400 + (ID) 300
Total energy: 10354.0 ( 73.43 by residue)
QMean score : 0.362
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