Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMRGWILAGLLLAALAAQAGEVHGVEVEARLRDYFFDAARRGDQAMLKEFVEAGFDLDVQDAKGYTALILAAYHGHGGAVEQLLEAGADPCVQDARGNTALMGAIFKGEVRIARRLIGAQCSPDQRNGAGQTAAMYAALFKREELLQALSARGADLGARDALGNSVESLRRGELNGTAAAR
1MJ0 Chain:A ((18-148))
------------------------------------LLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKFGKT----------------
General information:
TITO was launched using:
RESULT:
Template:
1MJ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58488 for 1132 contacts (-51.7/contact) +
2D Compatibility (PS) -15176 + (NN) -15815 + (LL) 4708
1D Compatibility (HY) -4400 + (ID) 2150
Total energy: -91321.0 ( -80.67 by residue)
QMean score : 0.771
(partial model without unconserved sides chains):
PDB file :
Tito_1MJ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MJ0-query.scw
PDB file :
Tito_Scwrl_1MJ0.pdb
: