Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGLPMNLIWFRCDLRTTDNSALLAAADGRPCLALYLLSPAQWREHDDAPCKVD-FWLRN-LGELQRQLAALNIPLLVRDCGHWRQAPEVIGRL--CRELGVGAVHVNQEYGVNEERRDQAVGQRLREQGVAFHSHLDQLFFAPGSVLTRTGGYFQVFSQFRKVCHERLYQALPGVRPRPQPQPPHALASDPLPDAVP---AFPRPADS-----LRRLWPAGEEVAQERLRDFADQHLADYHERRDFPALPGTSQLSPYLAAGVLSPRQCLDAALV-----ANRGEFSGGQQGAATWINELLWREFYKHILVGYPRVSRHRPFREETEALRWRQAPAELEAWQQGRTGIPIIDAAMRQLLATGWMHNRLRMVVAMFLSKNLLIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRLFNPLSQSERFDPRGEFIRHWLPELAGLERKAIHDP--------SSLGLFAGVDYPRPMVDLKASRERALAAFRNLPPRDGRA |
1U3C Chain:A ((15-491)) | -------IVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEE--EGHYHPGRVSRWWLKNSLAQLDSSLRSLGTCLITK-----RSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYD------PESPLLPPKKIISGDVSKCVADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGN-EAGEESVNLFLKSIGLREYSRYISFNHP-YSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQM------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145434 for 3726 contacts (-39.0/contact) +
2D Compatibility (PS) -48497 + (NN) -26754 + (LL) 732
1D Compatibility (HY) -30400 + (ID) 7500
Total energy: -257853.0 ( -69.20 by residue)
QMean score : 0.455
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