Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKLFQLKAHNTTVRTEILAGITTFLTMAYILFVNPSILGETGMDKGAVFVATCLAAAIGSTIMGLIANYP-------IALAPGMGLNAFFTYTVVLHMGHSWQVALGAVFISATMFFLLSIFRIREWIINSIPLPLRSAIAAGIGLFLALIALQNAGIVVDNPATLIGMG-DLTKPAPILATL--GFILIVALEARSVTGAVLIGILVVTAIAI------LLGVTQFGGVVSMPPSLAPTFL-----QLDIKGALDIGLVSVIFAFLFVDLFDNSGTLIGVAKRAGLMGKDGHMPKMGRALIADSTAAMGGSLLGTSTTTSYIESAAGVSAGGRTGLTAIVVAILFLLALFFAPLAGSVPAFATAPALLFVAVLMASGLAEIDWEDITVAAPVVVTALAMPFTYSIATGIAFGFIS-WTAIKVLSGRWRELNPALVILSVLFVIKLGFFNA |
| 3FHC Chain:A ((9-405)) | ----IPEREMKDFQFRA--LKKVRIFDSPEELPKERSSLLAVSN-KYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN--LTLSACMMSSEYGSIIAFFDVRTFSNEAQKRPF-----------------AYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAAD------------GTLETSPDVVMALLPKKEEK------HPEIFVNFMEPCYG-SCTERQ--HHYYLSYIEEWDLVLAASAASTE-----------VSILARQSDQINWESWLLEDSSRAE---LPVTDKSDDSLPMGVVVDYTN-----------APVLMLLSTDGVLCPFYMIN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -415168 for 2953 contacts (-140.6/contact) +
2D Compatibility (PS) -37157 + (NN) 6966 + (LL) 7572
1D Compatibility (HY) -16400 + (ID) 3450
Total energy: -457637.0 ( -154.97 by residue)
QMean score : 0.181
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