Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFNTEVQPGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDDSQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKP---LDRGMKNVAFISDPDGYWVEIVQASLNGEMGRG
4MTT Chain:A ((5-125))
-------------------------HSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQ---------DERA------AAALELTHNW----DRDGYTQGD----GYGHLAIEVEDAAVTCARARALGYRVTREAGLMQHGRSVIAFLEDPDGYKVELIQ----------
General information:
TITO was launched using:
RESULT:
Template:
4MTT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74232 for 814 contacts (-91.2/contact) +
2D Compatibility (PS) -12798 + (NN) -4670 + (LL) 2444
1D Compatibility (HY) -10000 + (ID) 2850
Total energy: -102106.0 ( -125.44 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_4MTT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MTT-query.scw
PDB file :
Tito_Scwrl_4MTT.pdb
: