Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQS--GQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSPVAG |
| 1Y12 Chain:A ((2-144)) | -AVDMFIKIGD-----V---------KGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGGG-AGKVNVQDLSFTKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGG-ENQVEYLIITLKEVLVSSVSTGGS------GGEDRLTENVTLNFAQVQVDYQPQKADGA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4231 for 874 contacts (4.8/contact) +
2D Compatibility (PS) -13292 + (NN) 4501 + (LL) 140
1D Compatibility (HY) 11200 + (ID) 350
Total energy: 6430.0 ( 7.36 by residue)
QMean score : -0.028
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