Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKSQEPTAALDAEQVAAYLSQHPEFFVEHDELIPELRIPHQPGDAVSLVERQVRLLRERNIEMRHRLSQLMDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEFQVPYVSLILFSDSSVS-V-GR-SVSSA--------EAHQAIGGLLSGGKTVCGVLRPHELAFLFGE-SDRDEIGSAAVVSLSF-QGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRFSSPLRSVR
3O5Y Chain:A ((4-145))
------------------------------------------------------------------------------------------------MSLDDIINNMIDKLKLLVHFDRISFLLLANETLKLSHVYPKGSHSLDIGSTIPKEQSLYWSALDQRQTIFRSLTDTQDNFYEKQYLAILDLKSILVIPIYSKNKRVGVLSIGRKQQIDWSLD-DLAFLEQLTDHLAVSIENVE-------
General information:
TITO was launched using:
RESULT:
Template:
3O5Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100539 for 913 contacts (-110.1/contact) +
2D Compatibility (PS) -13688 + (NN) -4337 + (LL) 8904
1D Compatibility (HY) -8400 + (ID) 1150
Total energy: -119210.0 ( -130.57 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_3O5Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O5Y-query.scw
PDB file :
Tito_Scwrl_3O5Y.pdb
: