Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI
2PII Chain:A ((1-112))
MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI
General information:
TITO was launched using:
RESULT:
Template:
2PII.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49386 for 686 contacts (-72.0/contact) +
2D Compatibility (PS) -12260 + (NN) -2065 + (LL) 0
1D Compatibility (HY) -14800 + (ID) 3850
Total energy: -82361.0 ( -120.06 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_2PII.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PII-query.scw
PDB file :
Tito_Scwrl_2PII.pdb
: