Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
3C2T Chain:A ((1-125))
MSSLLVK----KLVESATTPMRGSEGAAGYDISSV--EDVVVPAMGRIAVSTGISIRVPD-GTYGRIAPRSGLAYKYGIDV--LAGVIDEDYTGEVKVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVLD-----------------
General information:
TITO was launched using:
RESULT:
Template:
3C2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103789 for 874 contacts (-118.8/contact) +
2D Compatibility (PS) -13622 + (NN) -5418 + (LL) -188
1D Compatibility (HY) -9200 + (ID) 2400
Total energy: -134617.0 ( -154.02 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_3C2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C2T-query.scw
PDB file :
Tito_Scwrl_3C2T.pdb
: