Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAA-PAWEGYTNAD----GSGLYWDLLKQVYAPY---GLDVKFINMPWNRANKLMTAGS---MV-DGVPGEIPGVE-GKLYAQLPIDIEYHGVMHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQR---DFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPIAQL-PPGKESFMTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ |
| 2YJP Chain:A ((49-282)) | -----------------------------------AAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTP--ERAEAVDFAD-PYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADAFFTKSHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWAKENP-N-FEVAIGNLGPA-EFIAPAVQKGN--ADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55655 for 1724 contacts (-32.3/contact) +
2D Compatibility (PS) -23206 + (NN) -2142 + (LL) 2892
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -84711.0 ( -49.14 by residue)
QMean score : 0.416
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