Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRTPHLLAIQSHVVFGHAGNAAAVFPMQRIGINVWPLNTVQFSNHTQYGRWTGQVLPPEQIPALVDGIAGIGELGNCDAVLSGYLGSAAQGRAILDVVARIKQANPRALYLCDPVMGHP--EKGCIVAPEVSDFL---LEEAAAVADYLCPNQLELDSFCDRQPNSLADCVEMARSLLARGPRAILVKHLNYPGKAGDTFEMLLVAADQAWH-------LQRPLLAFPRQP---VGVGDLASGLFLSRLLLG-DDLRNAFEFTGAAVHEVLLETQACGS-------------YELELVRAQDRIAHPRVRFDAVRL |
| 4EN4 Chain:A ((3-312)) | --EECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDELQELYEGLR-LNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPE--DLLPVYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNY--LIVLGSQRRRNPAGSVVMERIRMDIRKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQRTIQCAKAQAGEGVRPSPMQLELRMVQSKRDIEDPEIVVQATVL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4EN4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -207643 for 2395 contacts (-86.7/contact) +
2D Compatibility (PS) -30269 + (NN) -8121 + (LL) 372
1D Compatibility (HY) -23200 + (ID) 4700
Total energy: -273561.0 ( -114.22 by residue)
QMean score : 0.508
|
|
|