Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPVVLITGAAGGLGRAIAKRFAQSHWRIAATDVDKEGLHALNAQV---PLDASG-VADLRSADNCHTLMSKILARTGRLDALVNAAGVWREGPVENFTEEDFDLVLGVNLKASFYMCQAAIP---YLKENQGSIVNISSDSGRQAYRGSAAYCASKAALTMLSKTLALELAEQGVRVNAVSPADIATPMLDYQAERYG----MGNPDGYKRALLKDYPQGKAARFIRPEEVAELVWYLCGPQAEAITGADLAVDFGLSAGR
1X7H Chain:A ((6-258))
--SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDR-ITARVPIG---RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL----
General information:
TITO was launched using:
RESULT:
Template:
1X7H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147236 for 2076 contacts (-70.9/contact) +
2D Compatibility (PS) -26126 + (NN) -11807 + (LL) 720
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -206349.0 ( -99.40 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_1X7H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X7H-query.scw
PDB file :
Tito_Scwrl_1X7H.pdb
: