Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINEEVVKENLKEVIERKSGKDVIALGIISSIVIKGKDIGFVLEISGDTQANEELRKNCEKAVKAIPGVGKVTVVAAGRKQAGQQRAKLHIEGVKNIIVVA-SGKGGVGKSTVALNLAFSLAKLKHKVALVDADIYGPSIPKMLGAEKLKPKIQGSRIIPIEKYGLHTIS-I-GYFI-DKDCAAMWRGPMITKA-LYNLLMGTKWSDIEYLVVDTPPGTGDVHLSL-MENFNLTGGIIVSTPQELALVDARKIYN-MFTKLSVPIFGIVEN-MSYFIQD-NSKIYIFGKDGTKVMSEELGIKLLGRIPLDPKICYASDCGNPLMLSEDLAGIYEDFAKDIRSFI |
| 2PH1 Chain:A ((4-250)) | --------------------------------------------------------------------------------RVTDEEIKERLGKIKSRIAV-MSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLGPSIPILFGLRNARIAVSAEGLEPVLTQKYGIKVMSMQFLLPKENTPVIWRGPLIA-GMIREFLGRVAWGELDHLLIDLPPGTGDAPLTVMQDA-KPTGVVVVSTPQELTAVIVEKAINMA-EETNTSVLGLVENMSYFVCPNCGHKSYIFGEGKGESLAKKYNIGFFTSIPIEEELIKLADSGRIEEYEKDWFE------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123772 for 1921 contacts (-64.4/contact) +
2D Compatibility (PS) -25974 + (NN) -11627 + (LL) 7776
1D Compatibility (HY) -14400 + (ID) 3650
Total energy: -171647.0 ( -89.35 by residue)
QMean score : 0.371
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