Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSLSGV-I-QGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA
5E0S Chain:A ((14-210))
-------------YILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSL--SGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKILTAEEAKDYGIIDTVLEYRKLS----
General information:
TITO was launched using:
RESULT:
Template:
5E0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111690 for 1425 contacts (-78.4/contact) +
2D Compatibility (PS) -21749 + (NN) -14170 + (LL) 1040
1D Compatibility (HY) -26800 + (ID) 9650
Total energy: -183019.0 ( -128.43 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_5E0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5E0S-query.scw
PDB file :
Tito_Scwrl_5E0S.pdb
: