Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLRAMTVAALSAADRCL
4G12 Chain:A ((24-215))
-----------------------SDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLRAMTVAALSAADRCL
General information:
TITO was launched using:
RESULT:
Template:
4G12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117480 for 1379 contacts (-85.2/contact) +
2D Compatibility (PS) -21570 + (NN) -20367 + (LL) 652
1D Compatibility (HY) -25200 + (ID) 9450
Total energy: -193415.0 ( -140.26 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_4G12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G12-query.scw
PDB file :
Tito_Scwrl_4G12.pdb
: