Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVKISQTADVQRFFEEASGQLNERGDPRTKALVRRILDDTAKLIEEMQVTPDEFWKAVDYLNRLGSRQEAGLLAAGLGLEHYLDLLLDAQDAE----AGLTGGTPRTIEGPLYVAGAPLSDGEARMDDGRDAGTVMFLQGRVSGPDGQPLAGAIVDVWHANTQGTYSYFDSSQSEYNLRRRIRTDADGRYRARSIVPSGYGCPSDGPTQELLDRLGRHGQRPAHIHFFVSAPGHRHLTTQINLAGDRYLWDDFAYATRDGLIGDLRFNDDPAAARDRGVEGGRFAELDFDFQLQASPAPAAERRSQRPRALQG |
2AZQ Chain:A ((3-309)) | --VKISHTADIQAFFNQVAGLDHAEGKPRFKQIILRVLQDTARLIEDLEITEDEFWHAVDYLNRLGGRNEAGLLAAGLGIE----HFLDLLQDAKDAEAGLGGGTPRTIEGPLYVAGAPLAQGEVRMDDGTDPGVVMFLQGQVFDANGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFFISAFGHRHLTTQINFAGDKYLWDDFAYATRDGLIGELRFVEDAAAARDRGVQGERFAELSFDFRLQGAQSPDAEARSHRPRALQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AZQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50645 for 2253 contacts (-22.5/contact) +
2D Compatibility (PS) -32783 + (NN) -20619 + (LL) 324
1D Compatibility (HY) -30000 + (ID) 11100
Total energy: -144823.0 ( -64.28 by residue)
QMean score : 0.532
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