Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDPTIAAGALIGGGLIMAGGAIGAGIGDGVAGNALISGVARQPEAQGRLFTPFFITVGLVEAAYFINLAFMALFVFATPVK
3ZK1 Chain:A ((8-85))
--TIVLGCSAVGAGLAM-IAGLGPGIGEGYAAGKAVESVARQPEARGSIISTMILGQAVAESTGIYSLVIALILLYANPFL
General information:
TITO was launched using:
RESULT:
Template:
3ZK1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36307 for 450 contacts (-80.7/contact) +
2D Compatibility (PS) -7894 + (NN) 72 + (LL) 276
1D Compatibility (HY) -6800 + (ID) 1100
Total energy: -51753.0 ( -115.01 by residue)
QMean score : 0.091
(partial model without unconserved sides chains):
PDB file :
Tito_3ZK1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZK1-query.scw
PDB file :
Tito_Scwrl_3ZK1.pdb
: