Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLLAGARDVTT--RSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNP--GLA-EADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLRAMTVAALSAADRCL
3G1L Chain:A ((42-235))
----------------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAAR-ATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGEN---
General information:
TITO was launched using:
RESULT:
Template:
3G1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89182 for 1364 contacts (-65.4/contact) +
2D Compatibility (PS) -20936 + (NN) -15079 + (LL) 1064
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -131783.0 ( -96.62 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_3G1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G1L-query.scw
PDB file :
Tito_Scwrl_3G1L.pdb
: