Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINEEVVKENLKEVIERKSGKDVIALGIISSIVIKGKDIGFVLEISGDTQANEELRKNCEKAVKAIPGVGKVTVVAAGRKQAGQQRAKLHIEGVKNIIVVASGKGGVGKSTVALNLAFSLAKLKHKVALVDADIYGPSIPKMLGAEKLKPKIQGSRIIPIEKYGLHTISIGYFIDKDCAAMW---------RGPMITKALYNLLMGTKWSDIEYLVVDTPPGTGDVHLSLMENFNLTGGIIVSTPQELALVDARKIYNMFTKLSVPIF----GIVENMSYFIQDNSKIYIFGKDGTKVMSEELGIKLLGRIPLDPKICYASDCGNPLMLSE--DLAGIYEDFAKDI------RSFI-- |
| 3Q9L Chain:A ((2-258)) | ----------------------------------------------------------------------------------------------ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVV----YDFVNVIQ-GDATLNQALIKDKRTENLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGALMALYFAD--EAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150163 for 2052 contacts (-73.2/contact) +
2D Compatibility (PS) -24645 + (NN) -5891 + (LL) 7828
1D Compatibility (HY) -8000 + (ID) 3050
Total energy: -183921.0 ( -89.63 by residue)
QMean score : 0.387
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