Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA
3P2L Chain:A ((6-198))
--------------LVPTVIEK-----RAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLG--GFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVIESREA-----
General information:
TITO was launched using:
RESULT:
Template:
3P2L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118454 for 1416 contacts (-83.7/contact) +
2D Compatibility (PS) -20657 + (NN) -10755 + (LL) 1200
1D Compatibility (HY) -18400 + (ID) 4700
Total energy: -171766.0 ( -121.30 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_3P2L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P2L-query.scw
PDB file :
Tito_Scwrl_3P2L.pdb
: