Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVKISQTADVQRFFEEASGQLNERGDPRTKALVRRILDDTAKLIEEMQVTPDEFWKAVDYLNRLGS-----RQEAGLLAAGLGLEHYLDLLLDAQDAEAGLTGGTPRTIEGPLYVAGAPLSDGEARMDDGRDAGTVMFLQGRVSGPDGQPLAGAIVDVWHANTQGTYSYFDSSQSEYNLRRRIRTDADGRYRARSIVPSGYGCPSDGPTQELLDRLGRHGQRPAHIHFFVSAPGHRHLTTQINLAGDRYLWDDFAYATRDGLIGDLRFNDDPA-AARDRGVEGGRFAELDFDFQLQASPAPAAERRSQRPRALQG |
| 1TMX Chain:A ((4-293)) | -PVSAEQQAREQDLVERVLRSFDATADPRLKQVMQALTRHLHAFLREVRLTEAEWETGIGFLTDAGHVTNERRQEFILLSDVLGAS----MQTIAMNNE-AHGDATEATVFGPFFVEGSPRIESGGDIAG-GAAGEPCWVEGTVTDTDGNPVPDARIEVWEADDDGFYDVQYDD-DRTAARAHLLSGPDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFMVTAPGRRTLVTHIFVEGDELLDRDSVFGVKDSLVKSFERQPAGAPTPGGREID-GPWSRVRFDIVLAPA----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56873 for 2069 contacts (-27.5/contact) +
2D Compatibility (PS) -30479 + (NN) -14383 + (LL) 1240
1D Compatibility (HY) -16000 + (ID) 4050
Total energy: -120545.0 ( -58.26 by residue)
QMean score : 0.515
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