Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVKISQTADVQRFFEEASGQLNERGDPRTKALVRRILDDTAKLIEEMQVTPDEFWKAVDYLNRLGSRQEAGLLAAGLGLEHYLDLLLDAQDAEAGLTGGTPRTIEGPLYVAGAPLSDGEARMDDG--RDAGTVMFLQGRVSGPDGQPLAGAIVDVWHANTQGTYSYFDSSQSEYNLRRRIRTDADGRYRARSIVPSGYGCPSDGPTQELLDRLGRHGQRPAHIHFFVSAPGHRHLTTQINLAGDRYLWDDFAYATRDGLIGDLRFNDDPAAARDRGVEGGRFAELDFDFQLQASPAPAAERRSQRPRALQG |
3HHY Chain:A ((25-280)) | ------------------ATA--DTSPERLAAIAKDALGALNDVILKHGVTYPEYRVFKQWLIDVGEGGEWPLFLDVFIEH----SVEEVLAR---SRKGTMGSIEGPYYIENSPELPSKCTLPMREEDEKITPLVFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLIVSAPGKESVTTQLYFKGGEWIDSDVASATKPELILDPKTGD------------DGKNYVTYNFVLDPA----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63247 for 1910 contacts (-33.1/contact) +
2D Compatibility (PS) -27717 + (NN) -16759 + (LL) 3536
1D Compatibility (HY) -13200 + (ID) 3900
Total energy: -121287.0 ( -63.50 by residue)
QMean score : 0.477
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