Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKITISKVLPDF---ETLVVGLFEDGELVSNGKVLQDK--QIINSIKKFSHFNGGFGEFFSVTLSDG---KNVIIVGLGKRDEWNENKELSVGGKIYCELGRLKIKQATVSIE----------GSAENIAYGAFLRSFKFDKYKTKKDEEITEVEEIMV-LAKDEQLNDAEKSFEHLRQEGEGIFLARTFITEPPNVLYPESYADCIKSELTKFG--LEIEVLDKKQMEKKKMGALLGVAQGSSKEPKLVVIRWNG-ASKEQKPIAFVGKGITFDTGGVSLKPSRGMESMKYDMAGSAAVVGVMRTLAGRKARINAVGVVALAENAIDGNAQRPSDVVTSMSGQTIEVLNTDAEGRLVLADALWYTQDRFAPEFMIDLATLTGAIVVALGNNEYAGLFSNNDELANRLVEAGNEANEKLWRFPMNETYDKIIDSPIADVQNIAPTGSGGDSIMAAQFLQRFVNDTCWAHLDIAGTAWHEKGTDISPKGAVGFGVRLLNKLVEKYYETSD-- |
| 1GYT Chain:A ((1-503)) | -MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERF-EPEAVIDVATLTGACVIALGH-HITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMAN--IGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSG----KAKGATGRPVALLAQFLLNRAGFNGEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245055 for 4339 contacts (-56.5/contact) +
2D Compatibility (PS) -51750 + (NN) -21880 + (LL) 616
1D Compatibility (HY) -31200 + (ID) 8700
Total energy: -357969.0 ( -82.50 by residue)
QMean score : 0.529
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