Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLLAGARDVTT--RSANLAAALDGLIEFHLDFALGEAD--LIRIQDRDLAHLPAVAERQVRK-AQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMK----AADSKPARTVRARAVLRAMTVAALSAADRCL
3QQA Chain:A ((12-211))
-----------------TPSQKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSGGSYSNIYDGFKSKEGLFFEILDDICKKHFHLIYSKTQEIKNGTLKEILTSFGLAFIEIFNQPEAVAFGKIIYSQVYDKDRHLANWIENNQQNFSYNILMGFFKQQNNSYMKKNAEKLAVLFCTMLKEPYHHLNVLINAPLKNKKEQKEHVEFVVNVFLNGI-------
General information:
TITO was launched using:
RESULT:
Template:
3QQA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72793 for 1270 contacts (-57.3/contact) +
2D Compatibility (PS) -20978 + (NN) -13403 + (LL) 636
1D Compatibility (HY) -9600 + (ID) 1650
Total energy: -117788.0 ( -92.75 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_3QQA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QQA-query.scw
PDB file :
Tito_Scwrl_3QQA.pdb
: