Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVKISQTADVQRFFEEASGQLNERGDPRTKALVRRILDDTAKLIEEMQVTPDEFWKAVDYLNRLGSRQEAGLLAAGLGLEHYLDLLLDAQDAEAGLTGGTPRTIEGPLYVAGAPLSDGE-ARMDDG-RDAGTVMFLQGRVSGPDGQPLAGAIVDVWHANTQGTYSYFDS-SQSEYNLRRRIRTDADGRYRARSIVPSGYGCPSDGPTQELLD-RLGRHGQRPAHIHFFVSAPGHRHLTTQINLAGDRYLWDDFAYATRDGLIGDLRFNDDPAAARDRGVEGGRFAELDFDFQLQASPAPAAERRSQRPRALQG |
| 3O5U Chain:A ((2-257)) | -------------------------ANTRVIELFDEFTDLIRDFIVRHEITTPEYETIMQYMISVGEAGEWPLWLDAFF-E----TTVDSVSYG--KGNWTSSAIQGPFFKEGAPLLTGKPATLPMRADEPGDRMRFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEIPKAGPTGQLMNSYLGRHSWRPAHIHIRITADGYRPLITQLYFEGDPYLDSDSCSAVKSELVLPVNKIDIDG---------ETWQLVDFNFILQHN----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61410 for 1856 contacts (-33.1/contact) +
2D Compatibility (PS) -27487 + (NN) -16893 + (LL) 3804
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -122886.0 ( -66.21 by residue)
QMean score : 0.535
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