Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYDQINSYLVDIFNRIMIIEEMSLKTSQFSDVSLKEMHTIEIIGKHSEVTPSDVARELMLTLGTVTTSLNKLEKKGYIERKRSSIDRRVVHLSLTKRGRLLDRLHSKFHKSMVSHIIEDLGEEDIKMLTSALGNLHKFLEDLV
2GXG Chain:A ((10-144))
----QIMSTIAKIYRAMSRELNRRLG---ELNLSYLDFLVLRATS-DGPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETFNKGIEIYKKLANEVTGDLSEDEVILVLDKISKILKRIEEIS
General information:
TITO was launched using:
RESULT:
Template:
2GXG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51458 for 857 contacts (-60.0/contact) +
2D Compatibility (PS) -14168 + (NN) -4542 + (LL) 536
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -76632.0 ( -89.42 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_2GXG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GXG-query.scw
PDB file :
Tito_Scwrl_2GXG.pdb
: