Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPHKENGQIIPVETHGIQMISMD-----FFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGTGDVALDIHTLIPKCNELIVTT-PHYAAASVASR-AGYMAAKNNHKIIGV--IENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLP----IEQPEPNGNGYVSALFNSSSTSGKAYKTLAEKIIPYLS------- |
| 3Q9L Chain:A ((2-258)) | ---------------------------------------------------------------------------------------------------ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGALMALYF---ADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQG---EPVILDINADAGKAYADTVERLLGEERPFRFIEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101579 for 2044 contacts (-49.7/contact) +
2D Compatibility (PS) -24771 + (NN) -705 + (LL) 9376
1D Compatibility (HY) -6400 + (ID) 2700
Total energy: -126779.0 ( -62.02 by residue)
QMean score : 0.388
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