Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKG-AKKIAILDVDFHHGNGTQDIFYERGDVFFASLH-GDPAEAFPHFLGYAEETGKGAGAGTTANY--------PMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISF--FKLTSPDYITMGRTIAA-SGVPLLVVMEGGYGVPEIGLNVANVLKGVAG |
| 3C10 Chain:A ((178-368)) | --------------------------------------------------------------------------------------------------------------------------------------------------KNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS-GAVDEVGAGSGEGFNVNVAWAGGLDPPMG-DPEYLAAFRIVVMPIAR--EFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85760 for 1470 contacts (-58.3/contact) +
2D Compatibility (PS) -19138 + (NN) -6474 + (LL) 11080
1D Compatibility (HY) -10800 + (ID) 3150
Total energy: -114242.0 ( -77.72 by residue)
QMean score : 0.187
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