Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNSTHRGMHTSLHLWNRSSYRLHSNASESLGKGYSDGGCYEQLFVSPEVFVTLGVISLLENILVIVAIAKNKNLHSPMYFFICSLAVADM---LVSVSNGSETIVITLLNSTDTDAQ---SFTVNIDNVIDSVICSSLLASICSLLSIAVDRYFTIFYALQYHNIMTVKRVGIIISCIWAACTVSGILFI--------------------IYSDSSAVIICLITMFFTMLALMASLYVHMFLMA------------RLHIKRIAVLPGTGAIRQG--ANMKGAITLTILIGVFVVCWAPFFLHLIFYISCPQNPYCVCFMSHFNLYLILIM---CNSIIDPLIYALRSQELRKTFKEIICCYPLGGLCDLSSRY |
| 3SN6 Chain:R ((200-490)) | -------------------------------------------------------------NVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHI----LTKTWTFGNFWCEFWTSID-----VLC--VTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGR------------------CLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN-------LIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLC-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269575 for 1543 contacts (-174.7/contact) +
2D Compatibility (PS) -22669 + (NN) -7742 + (LL) 6188
1D Compatibility (HY) -22000 + (ID) 4100
Total energy: -319898.0 ( -207.32 by residue)
QMean score : 0.216
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