Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEFVLLGFSDIPNLHWMLFSIFLLMYLMILMCNGIIILLIKI---HPALQTPMYFFLSNFSLLEICYVTIIIPRMLMDIWTQKGNISLFA---CATQMCFFLMLGGTECLL-LTVMAYDRYVAICKPL-QYPLVMNHKV------------CIQLIIASWTITIPVVIGETCQI-FLLPFCGTNTINHFFCDIPPILKLACGNIFVNEITVHVVAVVFITVPFLLIVVSYGKIISNILKLSSARGKA----KAFSTCSSHLIVVILFF------GAGTITYLQPKPHQFQRMGKL---ISLFYTILIPTLNPIIYTLRNKDIMVALRKLLAKLLT
2PED Chain:A ((38-313))---------------WQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLF---MVFGGFTTTLYTSLHGYFVFGPTGCNLE-GFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETN----------------------NESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYI--FTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN


General information:
TITO was launched using:
RESULT:

Template: 2PED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -224933 for 1781 contacts (-126.3/contact) +
2D Compatibility (PS) -24201 + (NN) -3080 + (LL) 3056
1D Compatibility (HY) -6400 + (ID) 800
Total energy: -256358.0 ( -143.94 by residue)
QMean score : 0.076

(partial model without unconserved sides chains):
PDB file : Tito_2PED.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PED-query.scw
PDB file : Tito_Scwrl_2PED.pdb: