Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNLTSMSGFLLMGFSDERKLQILHALVFLVTYLLALTGNLLIITIITVDRRLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMGNGYISLVQCILQVFFFIALASSEVAILTVMSYDRYAAICQPLHYETIMDPRACRHAVIAVWIAGGLSGLMHAAINFSIPLCGKRVIHQFFCDVPQMLKL----ACSYEFINEIALAAFTTSAAF-ICLISIVLSYIRIF----STVLRIPSAEGRTKVFSTCLPHLFVATFFLSAAGFEFLRLP---------SDSSSTVDLVFSVFYTV--IPPTLNPVIYSLRNDSMKAALRKMLSKEELPQRKMCLKAMFKL |
| 2YCX Chain:A ((9-294)) | ---------------QWEAGMSLLMALVVL----LIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWA-------ISALVSF-LPI----MMHWWRDEDPQALKCYQDPGCC-DFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVM-LMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFK--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216490 for 1891 contacts (-114.5/contact) +
2D Compatibility (PS) -27409 + (NN) -7047 + (LL) 4144
1D Compatibility (HY) -24800 + (ID) 3450
Total energy: -275052.0 ( -145.45 by residue)
QMean score : 0.261
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