Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLMKEVRGRNQTEVTEFLLLGLSDNPDLQG--VLFALFLLIYMANMVGNLGMIVLIKIDLCLHTPMYFFLSSLSFVDASYSSSVTPKMLVNLMAENKAISFHGCAAQFYFFGSFLGTECFLLAMMAYDRYAAIWNPLLYPVLVSGR-------ICFLL---IATSFLAGCGNAAIHTGMTFRLSFCGSNRINHFYCDTPPLLKLSCSDTHFNGIVIMAFSSFIVISCVMIVLISYLCIFIAVLKMPSL-------EG-RHKAFSTCASYLMAVTIFFGTILFMYLRPTSSYSMEQDKVVSVFYTVIIPVLNPLIYSLKNKDVKKALKKILWKHIL |
| 3EML Chain:A ((18-301)) | ----------------------------IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQ-------SQGCGEGQVACLFEDVVPM----------NYMVYFNFFACVLVP-LLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYY---TIGIGHLLTKSPSLNAAKS-ELDKAIGRNTNGVI--TKDEAEKLFNQDVDAAVRGILRNAKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194873 for 1681 contacts (-115.9/contact) +
2D Compatibility (PS) -25850 + (NN) -2303 + (LL) 3828
1D Compatibility (HY) -16800 + (ID) 3500
Total energy: -239498.0 ( -142.47 by residue)
QMean score : 0.092
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