Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGVNDSSLQGFVLMGISDHPQLEMIFFIAILFSYLLTLLG---NSTIILLSRLEARLHTPMYFFLSNLSSLDLAFATSSVPQMLINLWGPGKTISYGGCITQLYV----FLWLGATECIL---------------LVVMAFDRYVAVCRPL------RYTAIMNPQLCWLLAVIACLGGLGNSVIQSTFTLQLPLCGHRRVEGFLCEVPAMIKLACG-------DTSLNQAVLNGVCTFFTAVPLSIIVISYCLIAQAVLKIRSAEGRRKAFNTCLS--------------HLLVVFLFYGSASYGYLLPAKNSKQDQGKF---ISLFYSLVTPMVNPLIYTLRNMEVKGALRRLLGKGREVG |
| 2G87 Chain:A ((46-327)) | --------------------------------YMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLF-------------------MVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMA-LACAAP--------------PLVGWSRY------IPEGMQCSCGIDYYTPHEETNNESFV--IYMFVVHFIIPLIVIFFCY-GQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAF-YIFTHQGS--DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168269 for 1495 contacts (-112.6/contact) +
2D Compatibility (PS) -23173 + (NN) -580 + (LL) 4972
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -192300.0 ( -128.63 by residue)
QMean score : 0.154
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