Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNITLYSFLYVLRLNEGNSTGRNIDERKKMQGENFTIWSIFFLEGFSQYPGLEVVLFVFSLVMYLTTLLG---NSTLILITILDSRLKTPMYLFLGNLSFMDICYTSASVPTLLVNLLSSQKTIIFSGCAVQMYLSLAMGSTECVLLAVMAYDRYVAICNPL-RYSIIMNRCVCARMATVSWVTGCLTALLETSFALQIP---LCGNLIDHFTCEILAVLKLACTSSLLMNTIMLVVSILLLPIPMLLVCISYIFILSTILRITSAEGRNKAFSTCGAHLTVVIL------------YYGAALSMYLKPSSSNAQKIDKIISLLYGVLTPMLNPIIYSLRNKEVKDAMKKLLGKITLHQTHEHL
2HPY Chain:A ((47-318))--------------------------------------------------------------MFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL-VGWSRYIPEGMQCSCGIDYYTPH-------EETNNESFVIYMFVVHFI---IPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTH-QGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEA


General information:
TITO was launched using:
RESULT:

Template: 2HPY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -205905 for 1912 contacts (-107.7/contact) +
2D Compatibility (PS) -25168 + (NN) 396 + (LL) 5992
1D Compatibility (HY) 1200 + (ID) 850
Total energy: -224335.0 ( -117.33 by residue)
QMean score : 0.199

(partial model without unconserved sides chains):
PDB file : Tito_2HPY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HPY-query.scw
PDB file : Tito_Scwrl_2HPY.pdb: