Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFTDRNYTLVTEFILLGFPTRPELQIVLFLMFLTLYAI-ILIGNIGLMLLIRIDPHLQTPMYFFLSNLSFVDLCYFSDIVPKMLVNFLSENKSISYYGCALQFY----FFCTFADTESFILAAMAYDRYVAICNPLLYTVVMSRGICMRLIVLSYLGGNMSSLVHTSFAFILKYCDKNVINHFFCDLPPLLKLSCTDTTINEWLLSTYGSSVEIICFIIIIISYFFILLSVLKIRSFSGRKKTFSTCASHLTSVTIYQGTLLFIYSRPSYLYSPNTDKIISVFYTIFIPVLNPLIYSL-----RNKD---VKDAAEKVLRSKVDSS |
3D4S Chain:A ((40-311)) | -------------------------WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWC--EFWTSIDVLCVTASI--WTLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHW-YRATHQEAINCY-------AEETCCDFFTNQ----AYAIASSIVSFYVPLVIMVFVYS-----RVFQEAKRQLNI----FEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKS-----PSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189462 for 1691 contacts (-112.0/contact) +
2D Compatibility (PS) -26387 + (NN) -6117 + (LL) 4680
1D Compatibility (HY) -20400 + (ID) 3100
Total energy: -240786.0 ( -142.39 by residue)
QMean score : 0.236
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