Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERGNQTEVGNFLLLGFAEDSDMQLLLHGLFLSMYLVTII---GNLLIILTISSDSHLHTPMYFFLSNLSFADICFTSTTVPKMLVNIQTQSKMITFAGCLTQIFFFIAFGCLDNLLLTMT-------AYDRFVAICYPLHYTVIMNPRLCGLLVLGSWCISVMGSLLETLTILRLSFCTNMEIPHFFC--DPSEVLKLACSDTFINN--------IVMYFVTIVLGVFPLCGILFSYSQIFSSVLRVSARG-------QHKAFSTCGSHLSVVSLFYGTGLGVYLSSAVTPPSRTSLAASVMYTM------VTPMLNPFIYSLRNKDMKGSLGRLLLRATSLKEGTIAKLS |
| 2Y00 Chain:A ((8-299)) | -----------------------QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIM----MHWWRDEDPQALKCYQDP------GCCD-FVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCW---LPFFLVNIVNVFNR-DLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180234 for 1659 contacts (-108.6/contact) +
2D Compatibility (PS) -24141 + (NN) -1198 + (LL) 5396
1D Compatibility (HY) -27600 + (ID) 3450
Total energy: -231227.0 ( -139.38 by residue)
QMean score : 0.090
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