Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAGNQTGFLEFILLGLSEDPELQPFIFGLFLSMYLVTVL---GNLLIILAISSDSHLHTPMYFFLSNLSWVDICFSTCIVP--KMLVNIQTENKAISYMDCLTQVYFSMFFPILDTLLLT-------VMAYDRFVAVCHPLHYMIIMNPHLCGLLVFVTWLIGVMTSLLHISLMMHLIFCKDFEIPHFFCELTYILQLACSDTFLNSTLIYFMTGVLGVFPLLGIIF----SYSRIASSIRKMSSSGGKQ--------KALSTCGSHLSVVSLFYGTGIGVHFTSAVTHS--SQKISVASVMYTVVTPMLNPFIYSLRNKDVKGALGSLLSRAASCL |
| 2YCY Chain:A ((10-298)) | -------------------------WEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTW---------LWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPI--MMH--WWRD-EDPQ---ALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR--DRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -202204 for 1763 contacts (-114.7/contact) +
2D Compatibility (PS) -25527 + (NN) 1464 + (LL) 3856
1D Compatibility (HY) -27600 + (ID) 3900
Total energy: -253911.0 ( -144.02 by residue)
QMean score : 0.149
|
|
|