Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASRYVAVGMI-LSQTVVGVLGSFSVLLHYLSFYCTGCRL-RSTDLIVKHLIVANFLALRCKGVPQTMAAF-GVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSV--FQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLRAMLLSFP-DVLCLGLMLWVSSSMVCILHRHKQRVQHIDR------------------------------------------------------------------------------------------------------------------------------------S----------------DLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLDN-PNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR |
| 3RZE Chain:A ((9-442)) | -----MPLVVVLSTICLVTVGLNLLVLYA----VRSERKLHTVGNLYIVSLSVADLIVGAVV-MPMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQ-QPLRYL----KYRTKTRASATILGAWFLSFLWVIPIL--GWNH---------RREDKCETDFYDVT---WFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171449 for 1929 contacts (-88.9/contact) +
2D Compatibility (PS) -27374 + (NN) -5636 + (LL) 2572
1D Compatibility (HY) -22800 + (ID) 2050
Total energy: -226737.0 ( -117.54 by residue)
QMean score : ?
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