Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSYKFLKEVLHRLKNIENTLKV------LDQSQLNVEDKVEQMGLLEEIRHEIISHNIIKESLAEAGTPSNK-KKGDSWQ---LKLIERMHKSNSAIPIDLVKSLSKVKIECQNLRRLSQSEPSSLEKLKERFADLVKLIRGVVSIKSQQLKCSKYDSLLADYDSDITEKDVKEIFPKLGKFFSDNIDRIIEKQKKDK-ITN-TQKIATQKQIELGSLCLQQIGVTSH---------HT--------FYHHPIDYDESDFCYGLFLLLRYSGHEIYQRCLAQNSISSSF---TRYIMCETQGLFMERMIGTSREFIEFIQPYIKEKLTIKGKVNAKINSVENLYLIFNKVNLSSPLKKADEFSLLANIMLRTKLEQDIINGTLEVKDLHDAWLEGMEHYKIPVKAKNELDTYFQDEYWVSGTMGYFPIKIIALIIAVQIFSFIKKNHYEFLGAIIKGDFGLLIGWLSQNVCS--AKCGFLDLLKKVTGKGLDVECCSSYLSEKYDLSQ |
| 1KA2 Chain:A ((7-499)) | NETIKQILAKYRRIWAIGHAQSVLGWDLEVNMPKEGILERSVAQGELSVLSHELLLHPEFVNLVEK----AKGLENLNEYERGIVRVLDRSIRIARAFPPEFIREVSETTSLATKAWEEAKAKD-DFSKFEPWLDKIISLAKRAAEYLGYEE--EPYDALLDLYEEGLRTRDVEKMFEVLEKKLKPLLDKILEEGKVPREHPLEKEKYEREWMERVNLWILQKFGFPLGTRARLDVSAHPFTTEFGIRDVRITTRYEGYDFRRTILSTVHEFGHALYELQQDERFMFTPIAGGVSLGIHESQSRFWENIIGRSKEFVELIYPVLKENLPFMSNY-----TPEDVYLYFNIVRPDFIRTEADVVTYNFHILLRFKLERLMVSEEIKAKDLPEMWNDEMERLLG-IRPRKYSEGILQDIHWAHGSIGYFPTYTIGTLLSAQLYYHIKKDIPDFEEKVAKAEFDPIKAWLREKIHRWGSIYPPKELLKKAIGEDMDAEYFVRWVKEKYL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228318 for 3622 contacts (-63.0/contact) +
2D Compatibility (PS) -48750 + (NN) -19838 + (LL) 356
1D Compatibility (HY) -24800 + (ID) 5150
Total energy: -326500.0 ( -90.14 by residue)
QMean score : 0.530
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