Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------MNYLICLKNLIREVIEGKVKEVVIDKGNKYYQVSKNTDKELLDGIMCKSKLKTKLLHSVK------------------------------------------------------------------------------------------------------------------------------- |
| 2YN5 Chain:A ((1-283)) | TPPNAPVVTYSDIVNDLIIMQGTAEAKSQLIITDSEGNTYTLTVPDNGKWSMAIPYPSEGKFTITSVDAIGNRSDDVPLDIMKEVPVISLSPDSDSGTVGDNITRDKQPTFIIGNL-----ESDVVVVQVDINGTVYNAEKNAD-----GVWFFTPGTPLADGSYTISVIASDAAGNQKNSLPITVTIDSTLTVPEIALAAGEDNGASDSDNVTNHTQPKFTLQHIDADVTGVTVNVTHNGVTDIYQATQGADGWTFTPPAAWNDGNYTLSVTVVDRAGNSQQSASLAVTVDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8413 for 231 contacts (-36.4/contact) +
2D Compatibility (PS) -5617 + (NN) 279 + (LL) 1248
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -15103.0 ( -65.38 by residue)
QMean score : 0.216
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