Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MCNQQTRVLISTILCRIAIWYDHMLFIDLVNIISREFCSAK--DVYYNILQLFGIAGLGAMVRPLGASVFGHIGDRYGRKMALTIAILLISIPSSLVAF-IPGYSRVG---------ITSTILLFAIHVTQGIALGAEQGGSSVYLIEHLSNKKKLGMFFGIISFGRSIGVLLFVMIVIICKKITD---FNAWGWRMPFTFSAIWGLMSAYSIYTLGETPAY--EKNREQRNLPNLPII-------ELVKRYKRALILAVLISVPVN------VAVGFTIFLRTIAKEIVQVEMYVTTYVNE---------IVLIITSILIPISSIALGMLADRVGKERIAILFIIITIILCCPMLSIAYYYKSYLIIMLSVMALSIIERGIN---PIGIVASELFPPNVRFSGVSLSRNISFALHGGFTPMICTWLTITFPQINFVAGLYIIFCLLISLIAILQIKS-----QDKNFDW------ |
| 4GC0 Chain:A ((5-479)) | YNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAE-LAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGR-KPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -384520 for 3753 contacts (-102.5/contact) +
2D Compatibility (PS) -42681 + (NN) -3932 + (LL) 148
1D Compatibility (HY) -19200 + (ID) 3600
Total energy: -453785.0 ( -120.91 by residue)
QMean score : 0.351
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