Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKDEKSKTLFEVEGAVTALLPAAEFRVKLDNEHEIICHVSGKVRRSKIRIIIGDRVLVEMSIYDRNAKKGRIIRRLKGTSDRTISK
2OQK Chain:A ((27-105))
-----VFKEEGQEYGQVQRMLGNGRLDAYCFDGQKRLCHIRGKMRK-KVWVNPGDIVLVSLRDFQD--SKGDIILKYTPDEARALKS
General information:
TITO was launched using:
RESULT:
Template:
2OQK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30725 for 525 contacts (-58.5/contact) +
2D Compatibility (PS) -7946 + (NN) 3899 + (LL) 528
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -40044.0 ( -76.27 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_2OQK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQK-query.scw
PDB file :
Tito_Scwrl_2OQK.pdb
: